Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
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ID History
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DB built by FlyBase

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Gene: Cyp49a1 FBgn0033524

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Description

Cytochrome P450 49a1

Gene Synonyms

Location

Primary_assembly 2R: 10,449,350-10,458,892 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 8 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cyp49a1-RE	FBtr0304592	2591	589aa	FBpp0293134	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7M1 Q9V5L3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Cyp49a1-RA	FBtr0088311	2351	589aa	FBpp0087403	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7M1 Q9V5L3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Cyp49a1-RD	FBtr0088313	2297	589aa	FBpp0089308	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7M1 Q9V5L3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Cyp49a1-RC	FBtr0088312	1656	415aa	FBpp0087404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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