Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
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Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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Molecular interactions
Regulation
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ID History
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DB built by FlyBase

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Gene: CG9003 FBgn0033639

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Location

Primary_assembly 2R: 11,641,477-11,651,616 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 7 transcripts (splice variants), 58 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9003-RB	FBtr0113067	3810	651aa	FBpp0111980	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYA6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG9003-RG	FBtr0330634	3693	437aa	FBpp0303484	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BI22	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG9003-RD	FBtr0113069	2902	437aa	FBpp0111982	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BI22	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG9003-RE	FBtr0330632	2885	455aa	FBpp0303482	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEK4	-	-
CG9003-RF	FBtr0330633	2885	497aa	FBpp0303483	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEU4	-	-
CG9003-RA	FBtr0088088	2703	464aa	FBpp0087190	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8M8	-	-
CG9003-RC	FBtr0113068	2368	426aa	FBpp0111981	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYA5	-	-

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Summary

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