Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG5174 FBgn0034345

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Gene Synonyms

Location

Primary_assembly 2R: 18,421,413-18,426,221 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 10 transcripts (splice variants) and 61 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5174-RO	FBtr0306637	2237	369aa	FBpp0297592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K897	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG5174-RP	FBtr0340359	2225	365aa	FBpp0309317	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGX1	-	-
CG5174-RB	FBtr0086690	2195	355aa	FBpp0085869	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB83 Q86NR1	-	-
CG5174-RN	FBtr0306636	1574	222aa	FBpp0297591	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7G1	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG5174-RA	FBtr0086686	1532	208aa	FBpp0085865	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB80 Q95RC4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG5174-RM	FBtr0301149	1514	202aa	FBpp0290372	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB79 Q8IGG3	-	-
CG5174-RH	FBtr0086687	1472	188aa	FBpp0085866	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JRI6	-	-
CG5174-RL	FBtr0301148	981	209aa	FBpp0290371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGL5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG5174-RJ	FBtr0086684	908	186aa	FBpp0085863	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB77	-	-
CG5174-RG	FBtr0086689	848	166aa	FBpp0085868	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB78	-	-

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Summary

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