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DB built by FlyBase

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Gene: mthl10 FBgn0035132

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Description

methuselah-like 10

Gene Synonyms

Location

Primary_assembly 3L: 332,801-342,915 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 7 transcripts (splice variants), 118 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
mthl10-RB	FBtr0072573	2457	585aa	FBpp0072472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0R5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
mthl10-RE	FBtr0306566	3020	575aa	FBpp0297521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGK2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
mthl10-RF	FBtr0333903	2942	575aa	FBpp0306034	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGK2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
mthl10-RG	FBtr0333904	2512	575aa	FBpp0306035	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGK2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
mthl10-RC	FBtr0306564	2415	584aa	FBpp0297519	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND17	-	-
mthl10-RD	FBtr0306565	2316	557aa	FBpp0297520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEX4	-	-
mthl10-RA	FBtr0072572	1844	577aa	FBpp0072471	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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