Summary
- Splice variants
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DB built by FlyBase

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Gene: CG16758 FBgn0035348

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Gene Synonyms

Location

Primary_assembly 3L: 2,499,372-2,503,606 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 95 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG16758-RH	FBtr0331414	1689	396aa	FBpp0303831	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PE19	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG16758-RG	FBtr0306577	1617	372aa	FBpp0297532	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND26	-	-
CG16758-RB	FBtr0072963	1560	353aa	FBpp0072833	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KV94 Q95TC1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG16758-RD	FBtr0072964	1488	329aa	FBpp0072834	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W004	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG16758-RE	FBtr0072965	1449	321aa	FBpp0072835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E4NKM8 Q7KV91	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG16758-RF	FBtr0072966	1245	328aa	FBpp0072836	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KV95	-	-

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Summary

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