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- Splice variants
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DB built by FlyBase

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Gene: wnd FBgn0036896

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Description

wallenda

Gene Synonyms

Location

Primary_assembly 3L: 19,624,406-19,635,783 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 86 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
wnd-RC	FBtr0074965	4512	977aa	FBpp0074733	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VW24	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
wnd-RA	FBtr0074963	4384	977aa	FBpp0074731	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VW24	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
wnd-RB	FBtr0074964	4307	977aa	FBpp0074732	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VW24	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
wnd-RD	FBtr0302513	3645	950aa	FBpp0291675	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMF6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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