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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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DB built by FlyBase

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Gene: Tbc1d8-9 FBgn0037074

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Description

TBC1 domain family member 8/9

Gene Synonyms

Location

Primary_assembly 3L: 21,337,681-21,343,716 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 57 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tbc1d8-9-RA	FBtr0078404	4176	1291aa	FBpp0078058	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP46	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Tbc1d8-9-RB	FBtr0331797	4540	1256aa	FBpp0304182	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PIF1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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