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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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DB built by FlyBase

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Gene: CG8420 FBgn0037664

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Gene Synonyms

Location

Primary_assembly 3R: 9,246,649-9,251,431 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 12 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG8420-RA	FBtr0081973	1959	531aa	FBpp0081453	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHH1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG8420-RB	FBtr0333190	1343	220aa	FBpp0305392	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGJ8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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