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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Pde6 FBgn0038237

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Description

Phosphodiesterase 6

Gene Synonyms

Location

Primary_assembly 3R: 14,513,901-14,558,304 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 64 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pde6-RC	FBtr0330048	6101	1124aa	FBpp0303081	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFZ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Pde6-RB	FBtr0300330	6355	1118aa	FBpp0289559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH87 Q9VFI9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Pde6-RD	FBtr0345168	5742	1118aa	FBpp0311378	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH87 Q9VFI9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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