Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
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DB built by FlyBase

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Gene: Mf FBgn0038294

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Description

Myofilin

Gene Synonyms

Location

Primary_assembly 3R: 15,170,625-15,181,510 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 17 transcripts (splice variants) and 7 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mf-RB	FBtr0083031	2110	365aa	FBpp0082490	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VFC7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Mf-RP	FBtr0345219	2827	119aa	FBpp0311414	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C529	-	-
Mf-RK	FBtr0306642	2535	119aa	FBpp0297597	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C529	-	-
Mf-RF	FBtr0302142	2020	313aa	FBpp0291352	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C553	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RJ	FBtr0302146	1954	313aa	FBpp0291356	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C553	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RM	FBtr0306644	1939	364aa	FBpp0297599	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C530 Q70VI1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RL	FBtr0306643	1905	364aa	FBpp0297598	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q70VI1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RD	FBtr0083033	1783	312aa	FBpp0082492	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95U15	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RO	FBtr0334928	1777	310aa	FBpp0306948	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG65 Q70VI4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RH	FBtr0302144	1723	236aa	FBpp0291354	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIK6	-	-
Mf-RQ	FBtr0345220	1440	168aa	FBpp0311415	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I062	-	-
Mf-RE	FBtr0083034	1345	166aa	FBpp0082493	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INF1	-	-
Mf-RI	FBtr0302145	1088	230aa	FBpp0291355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIK9	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Mf-RG	FBtr0302143	879	157aa	FBpp0291353	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VFC6	-	-
Mf-RC	FBtr0083032	824	168aa	FBpp0082491	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I062	-	-
Mf-RN	FBtr0334927	814	157aa	FBpp0306947	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VFC6	-	-
Mf-RA	FBtr0083030	813	157aa	FBpp0082489	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A3Y6 Q9VFC6	-	-

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Summary

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