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DB built by FlyBase

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Gene: Gyc88E FBgn0038295

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Description

Guanylyl cyclase at 88E

Gene Synonyms

Location

Primary_assembly 3R: 15,150,375-15,191,242 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 111 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Gyc88E-RD	FBtr0110961	4824	1097aa	FBpp0110261	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IJ74 Q8INF0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Gyc88E-RE	FBtr0306245	4049	1097aa	FBpp0297355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INF0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Gyc88E-RF	FBtr0334926	4028	1090aa	FBpp0306946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058U5 Q8MZE0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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