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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG9997 FBgn0039597

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Location

Primary_assembly 3R: 28,755,484-28,756,979 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9997-RB	FBtr0336789	1325	330aa	FBpp0307765	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1P7E7 B1P7E8 B1P7E9 B1P7F0 B1P7F1 B1P7F2 B1P7F3 B1P7F6 Q4V686 Q4V6E2 Q9VAT8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG9997-RA	FBtr0085314	1030	330aa	FBpp0084683	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VAT8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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