Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
- Variant image
- Structural variants
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DB built by FlyBase

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Gene: CG11360 FBgn0039920

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Gene Synonyms

Location

Primary_assembly 4: 671,142-690,650 forward strand.

BDGP6.46:AE014135.4

About this gene

This gene has 4 transcripts (splice variants) and 70 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG11360-RC	FBtr0310539	6932	628aa	FBpp0302676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4F3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11360-RA	FBtr0089091	5558	628aa	FBpp0088160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4F3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11360-RE	FBtr0310541	4156	628aa	FBpp0302678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4F3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11360-RD	FBtr0310540	3716	628aa	FBpp0302677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V5T0 Q4V5Z4 Q6IIW7 Q9V4F3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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