Summary
- Splice variants
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DB built by FlyBase

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Gene: armi FBgn0041164

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Description

armitage

Gene Synonyms

Location

Primary_assembly 3L: 3,461,317-3,466,314 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 63 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
armi-RD	FBtr0309841	4151	1188aa	FBpp0301575	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHG1 K7WKS3 K7WQ31 K7WS88 K7X538 L0CPE8 L0CPF3 L0CPM5 L0CQR7 L0CQS0 L0CR52 L0CR57 L0CRG8 Q6J5K9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
armi-RB	FBtr0100641	4145	1188aa	FBpp0100102	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6J5K9	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
armi-RC	FBtr0309840	3631	1154aa	FBpp0301574	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDG7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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