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DB built by FlyBase

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Gene: tral FBgn0041775

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Description

trailer hitch

Gene Synonyms

Location

Primary_assembly 3L: 12,515,059-12,520,954 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 9 transcripts (splice variants) and 68 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tral-RH	FBtr0332641	2911	657aa	FBpp0304887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF20	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
tral-RB	FBtr0332635	4155	652aa	FBpp0304881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTZ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tral-RD	FBtr0332637	4137	646aa	FBpp0304883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFF9	-	-
tral-RC	FBtr0332636	2908	656aa	FBpp0304882	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF14	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tral-RF	FBtr0332639	2899	653aa	FBpp0304885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PI44	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tral-RA	FBtr0075959	2896	652aa	FBpp0075691	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTZ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tral-RI	FBtr0332642	2881	647aa	FBpp0304888	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFG3	-	-
tral-RG	FBtr0332640	2869	643aa	FBpp0304886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCB7	-	-
tral-RE	FBtr0332638	2866	642aa	FBpp0304884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFB2	-	-

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Summary

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