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Summary
- Splice variants
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DB built by FlyBase

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Gene: LRP1 FBgn0053087

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Description

LDL receptor protein 1

Gene Synonyms

Location

Primary_assembly 2R: 8,174,165-8,226,438 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 57 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LRP1-RF	FBtr0344893	15774	4752aa	FBpp0311204	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFD1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
LRP1-RG	FBtr0344894	15708	4730aa	FBpp0311205	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7C4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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