Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG33978 FBgn0053978

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Location

Primary_assembly 4: 157,575-175,639 reverse strand.

BDGP6.46:AE014135.4

About this gene

This gene has 5 transcripts (splice variants) and 22 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG33978-RC	FBtr0308251	7548	2289aa	FBpp0300571	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2PDM3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG33978-RE	FBtr0310436	7461	2289aa	FBpp0302584	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z357 Q2PDM3 Q6IIX1	-	-
CG33978-RD	FBtr0310435	6914	1965aa	FBpp0302583	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MLI5	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG33978-RF	FBtr0310437	6779	1951aa	FBpp0302585	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPM5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG33978-RG	FBtr0334300	6722	1945aa	FBpp0306415	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPW2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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