Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG40160 FBgn0058160

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Gene Synonyms

Location

Primary_assembly 3L: 26,215,815-26,229,433 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 86 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG40160-RH	FBtr0333380	4869	421aa	FBpp0305572	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RS6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40160-RE	FBtr0301802	1627	421aa	FBpp0291016	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RS6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40160-RA	FBtr0113813	1491	421aa	FBpp0112536	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RS6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40160-RG	FBtr0301804	1478	421aa	FBpp0291018	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RS6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40160-RD	FBtr0301797	1445	421aa	FBpp0291011	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RS6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG40160-RF	FBtr0301803	1422	421aa	FBpp0291017	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RS6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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