Summary
- Splice variants
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Sequence
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Pde11 FBgn0085370

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Description

Phosphodiesterase 11

Gene Synonyms

Location

Primary_assembly 2L: 18,532,025-18,590,342 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 6 transcripts (splice variants), 72 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pde11-RF	FBtr0343830	6456	1451aa	FBpp0310380	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJ79 X2J6P6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde11-RE	FBtr0303163	6515	1117aa	FBpp0292262	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRK1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde11-RC	FBtr0112545	5886	1407aa	FBpp0111457	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J8Z1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde11-RB	FBtr0112544	5639	1451aa	FBpp0111456	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJ79 X2J6P6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde11-RD	FBtr0303162	5506	1161aa	FBpp0292261	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSJ0	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Pde11-RG	FBtr0343831	4973	1407aa	FBpp0310381	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J8Z1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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