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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: pan FBgn0085432

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Description

pangolin

Gene Synonyms

Location

Primary_assembly 4: 69,326-114,270 forward strand.

BDGP6.46:AE014135.4

About this gene

This gene has 9 transcripts (splice variants) and 82 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pan-RJ	FBtr0112657	6005	1192aa	FBpp0111569	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NNZ9 Q8IMA8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
pan-RR	FBtr0309803	8472	751aa	FBpp0301556	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91943	-	-
pan-RQ	FBtr0308615	4954	494aa	FBpp0300839	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9XVM0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
pan-RH	FBtr0100245	4219	747aa	FBpp0099631	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
pan-RA	FBtr0089161	4129	751aa	FBpp0088228	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91943	-	-
pan-RD	FBtr0089162	4095	751aa	FBpp0088229	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AVX1 P91943	-	-
pan-RI	FBtr0100246	3795	410aa	FBpp0099632	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
pan-RS	FBtr0334301	3101	733aa	FBpp0306416	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
pan-RB	FBtr0089159	3023	751aa	FBpp0088226	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91943	-	-

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Summary

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