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DB built by FlyBase

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Gene: bun FBgn0259176

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Description

bunched

Gene Synonyms

Location

Primary_assembly 2L: 12,455,540-12,546,611 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 10 transcripts (splice variants) and 44 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
bun-RG	FBtr0299658	5921	1331aa	FBpp0288933	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RKT3 Q24523	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bun-RF	FBtr0300523	7023	1097aa	FBpp0289750	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bun-RA	FBtr0300521	5938	1206aa	FBpp0289748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bun-RP	FBtr0346622	5139	1137aa	FBpp0312202	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J847	-	-
bun-RD	FBtr0299652	3668	226aa	FBpp0288927	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
bun-RO	FBtr0339528	3490	192aa	FBpp0308611	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCT7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bun-RE	FBtr0300522	2832	254aa	FBpp0289749	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bun-RB	FBtr0299656	2728	219aa	FBpp0288931	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24522	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bun-RH	FBtr0300524	2106	226aa	FBpp0289751	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
bun-RC	FBtr0299657	1754	189aa	FBpp0288932	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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