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DB built by FlyBase

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Gene: ATP8A FBgn0259221

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Description

ATPase 8A

Gene Synonyms

Location

Primary_assembly 2R: 13,414,978-13,439,051 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 14 transcripts (splice variants), 65 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ATP8A-RH	FBtr0299757	5566	1350aa	FBpp0289035	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ATP8A-RQ	FBtr0299765	5460	1265aa	FBpp0289043	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZG0	-	-
ATP8A-RG	FBtr0299755	5273	1324aa	FBpp0289033	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF5	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ATP8A-RP	FBtr0299764	5080	1301aa	FBpp0289042	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E990	-	-
ATP8A-RI	FBtr0299756	4974	1216aa	FBpp0289034	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AWM7	-	-
ATP8A-RR	FBtr0303100	4930	1082aa	FBpp0292219	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD16	-	-
ATP8A-RO	FBtr0299763	4787	1275aa	FBpp0289041	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF6	-	-
ATP8A-RK	FBtr0299759	4658	1176aa	FBpp0289037	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9C8	-	-
ATP8A-RJ	FBtr0299758	4655	1095aa	FBpp0289036	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF7	-	-
ATP8A-RN	FBtr0299762	4553	1275aa	FBpp0289040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF6	-	-
ATP8A-RL	FBtr0299760	4552	1091aa	FBpp0289038	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF9	-	-
ATP8A-RE	FBtr0299754	4365	1150aa	FBpp0289032	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0I4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ATP8A-RM	FBtr0299761	4261	1150aa	FBpp0289039	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0I4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ATP8A-RS	FBtr0306698	3980	1127aa	FBpp0297637	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7Y0 D0Z766	-	-

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Summary

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