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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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DB built by FlyBase

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Gene: cwo FBgn0259938

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Description

clockwork orange

Gene Synonyms

Location

Primary_assembly 3R: 10,388,258-10,400,752 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 60 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
cwo-RA	FBtr0082246	4632	698aa	FBpp0081723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AVW7 B7FNP5 Q9VGZ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
cwo-RC	FBtr0305152	5092	621aa	FBpp0293682	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MRI9	-	-
cwo-RB	FBtr0305151	4508	621aa	FBpp0293681	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MRI9	-	-

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Summary

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