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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- Variant table
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DB built by FlyBase

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Gene: app FBgn0260941

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Description

approximated

Gene Synonyms

Location

Primary_assembly 3L: 12,206,238-12,266,841 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 10 transcripts (splice variants), 72 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
app-RJ	FBtr0301054	6652	755aa	FBpp0290276	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTV6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
app-RK	FBtr0301055	6630	755aa	FBpp0290277	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTV6	-	-
app-RL	FBtr0301056	4559	693aa	FBpp0290278	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEY9	-	-
app-RM	FBtr0301057	4537	693aa	FBpp0290279	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEY9	-	-
app-RT	FBtr0339925	4505	693aa	FBpp0308957	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEY9	-	-
app-RO	FBtr0304661	4422	382aa	FBpp0293203	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NF95	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
app-RR	FBtr0334102	4156	693aa	FBpp0306224	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEY9	-	-
app-RH	FBtr0301052	2889	398aa	FBpp0290274	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0A6 Q6NLJ6	-	-
app-RI	FBtr0301053	2867	398aa	FBpp0290275	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0A6	-	-
app-RS	FBtr0334103	2679	476aa	FBpp0306225	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDQ1 Q8SY85	-	-

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Summary

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