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DB built by FlyBase

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Gene: Cad86C FBgn0261053

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Description

Cadherin 86C

Gene Synonyms

Location

Primary_assembly 3R: 10,827,079-10,849,030 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 28 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cad86C-RF	FBtr0304665	6665	1949aa	FBpp0293207	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6E3 Q95SX1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Cad86C-RC	FBtr0301933	7303	1943aa	FBpp0291145	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K655	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Cad86C-RG	FBtr0304666	7212	1008aa	FBpp0293208	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6P8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Cad86C-RD	FBtr0304663	6647	1943aa	FBpp0293205	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K655 Q9VGW1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Cad86C-RE	FBtr0304664	6563	1915aa	FBpp0293206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K720	-	-

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Summary

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