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DB built by FlyBase

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Gene: rgn FBgn0261258

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Description

regeneration

Gene Synonyms

Location

Primary_assembly 3L: 21,382,501-21,424,416 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 7 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
rgn-RC	FBtr0333385	3991	808aa	FBpp0305577	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFV8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rgn-RA	FBtr0078346	4322	800aa	FBpp0078002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y102	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
rgn-RB	FBtr0309230	3942	808aa	FBpp0301169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFV8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rgn-RD	FBtr0333386	3918	800aa	FBpp0305578	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y102	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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