Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: haf FBgn0261509

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Description

hattifattener

Gene Synonyms

Location

Primary_assembly 2L: 1,555,129-1,609,389 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 8 transcripts (splice variants), 123 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
haf-RI	FBtr0474154	5009	1347aa	FBpp0423153	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K327 E3CTP3 F2FB93	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
haf-RE	FBtr0310020	6069	982aa	FBpp0301723	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQ25	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
haf-RD	FBtr0310019	6000	981aa	FBpp0301722	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC50	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
haf-RC	FBtr0310018	5305	982aa	FBpp0301721	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQ25	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
haf-RG	FBtr0474152	5009	988aa	FBpp0423151	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K0X3	-	-
haf-RB	FBtr0310017	5009	981aa	FBpp0301720	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC50	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
haf-RH	FBtr0474153	5009	1001aa	FBpp0423152	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K216	-	-
haf-RF	FBtr0344146	4915	852aa	FBpp0310559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3CTP3 X2J6N9	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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