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DB built by FlyBase

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Gene: osa FBgn0261885

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Description

osa

Gene Synonyms

Location

Primary_assembly 3R: 17,687,818-17,718,350 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 6 transcripts (splice variants) and 81 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
osa-RB	FBtr0089581	10714	2716aa	FBpp0088543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIN6 Q8IN94	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
osa-RA	FBtr0089582	10675	2703aa	FBpp0088544	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6IDZ6 Q1EBX4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
osa-RD	FBtr0301487	10423	2716aa	FBpp0290702	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIN6 Q8IN94	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
osa-RF	FBtr0335025	10243	2559aa	FBpp0307031	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGD1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
osa-RC	FBtr0089583	10234	2556aa	FBpp0088962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6IDZ6 Q7KSE8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
osa-RE	FBtr0335024	9940	2555aa	FBpp0307030	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHB1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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