Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: pyd FBgn0262614

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Description

polychaetoid

Gene Synonyms

Location

Primary_assembly 3R: 8,827,068-8,931,896 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 12 transcripts (splice variants), 69 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pyd-RO	FBtr0310205	8533	2395aa	FBpp0301889	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6Y7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pyd-RA	FBtr0305297	7195	2090aa	FBpp0293840	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHK3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
pyd-RJ	FBtr0305301	6665	1735aa	FBpp0293844	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YDB8 Q7K4E2 Q95RX8 Q9VHK1	-	-
pyd-RM	FBtr0305304	6058	1301aa	FBpp0293847	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JQV7	-	-
pyd-RK	FBtr0305302	5744	1446aa	FBpp0293845	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JQV8	-	-
pyd-RB	FBtr0305295	5688	1371aa	FBpp0293838	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q94880 Q9VHK4	-	-
pyd-RI	FBtr0305298	5505	1386aa	FBpp0293841	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0U1	-	-
pyd-RP	FBtr0479647	5408	1390aa	FBpp0424324	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6F7U5U6 G4LU41	-	-
pyd-RL	FBtr0305303	5123	1285aa	FBpp0293846	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6C7	-	-
pyd-RG	FBtr0305299	5048	1301aa	FBpp0293842	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JQV7	-	-
pyd-RC	FBtr0305296	5024	1293aa	FBpp0293839	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INQ0	-	-
pyd-RF	FBtr0305294	4196	1149aa	FBpp0293837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MQQ3	-	-

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Summary

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