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DB built by FlyBase

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Gene: eIF4H1 FBgn0262734

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Description

eukaryotic translation initiation factor 4H1

Gene Synonyms

Location

Primary_assembly X: 16,448,665-16,454,972 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 57 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
eIF4H1-RD	FBtr0343632	2730	388aa	FBpp0310225	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q26272 Q29R50 X2JC79	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
eIF4H1-RA	FBtr0074279	3898	325aa	FBpp0074055	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXF8	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
eIF4H1-RB	FBtr0074280	3895	324aa	FBpp0074056	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NH88 Q8IR13	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
eIF4H1-RE	FBtr0343633	2816	317aa	FBpp0310226	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JE34	-	-
eIF4H1-RC	FBtr0074281	2640	358aa	FBpp0089381	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KUX7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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