Summary
- Splice variants
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Pan-taxonomic Compara
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- Variant table
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DB built by FlyBase

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Gene: Mitf FBgn0263112

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Description

Mitf

Gene Synonyms

Location

Primary_assembly 4: 1,198,852-1,224,467 forward strand.

BDGP6.46:AE014135.4

About this gene

This gene has 4 transcripts (splice variants) and 74 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mitf-RC	FBtr0307328	3226	837aa	FBpp0298329	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KGP2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mitf-RA	FBtr0307326	4032	730aa	FBpp0298327	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6WSQ9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mitf-RD	FBtr0307329	3948	704aa	FBpp0298330	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9XVQ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Mitf-RB	FBtr0307327	3009	730aa	FBpp0298328	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6WSQ9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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