Summary
- Splice variants
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DB built by FlyBase

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Gene: sick FBgn0263873

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Description

sickie

Gene Synonyms

Location

Primary_assembly 2L: 19,796,365-19,958,424 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 12 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sick-RJ	FBtr0329846	9896	2707aa	FBpp0302887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UUQ6 M9PGA0 Q8MR85 X5CN34	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
sick-RN	FBtr0344856	10063	2176aa	FBpp0311171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sick-RI	FBtr0329845	9210	2707aa	FBpp0302886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGA0	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
sick-RH	FBtr0329838	8191	2192aa	FBpp0302879	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBE4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sick-RL	FBtr0332237	8123	2206aa	FBpp0304536	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD86	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sick-RB	FBtr0329842	8096	2197aa	FBpp0302883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIQ9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
sick-RM	FBtr0336736	7649	1993aa	FBpp0307716	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDS6	-	-
sick-RF	FBtr0329840	7444	2018aa	FBpp0302881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDS2	-	-
sick-RD	FBtr0329843	7328	2018aa	FBpp0302884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDS2	-	-
sick-RK	FBtr0332236	5661	1369aa	FBpp0304535	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBE5	-	-
sick-RG	FBtr0329839	5484	1346aa	FBpp0302880	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIR0	-	-
sick-RE	FBtr0329844	5383	1346aa	FBpp0302885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058X9 Q9VIR0	-	-

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Summary

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