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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG43896 FBgn0264488

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Location

Primary_assembly 3L: 11,976,111-11,983,764 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 33 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG43896-RD	FBtr0345688	6617	2113aa	FBpp0311737	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF73	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG43896-RC	FBtr0332817	6474	2113aa	FBpp0305040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7VJV2 M9PF73 Q8SYK2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG43896-RB	FBtr0332816	4207	1324aa	FBpp0305039	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RIF2 Q9VTR8	-	-

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Summary

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