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DB built by FlyBase

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Gene: Nna1 FBgn0265726

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Description

Nna1 carboxypeptidase

Gene Synonyms

Location

Primary_assembly X: 13,692,292-13,717,835 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 10 transcripts (splice variants) and 35 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nna1-RH	FBtr0340678	6170	1890aa	FBpp0309520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JBR4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nna1-RI	FBtr0340679	6167	1889aa	FBpp0309521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BHW8 X2JDN6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nna1-RJ	FBtr0340680	5582	1694aa	FBpp0309522	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JK43	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nna1-RA	FBtr0340671	4542	1201aa	FBpp0309513	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VY99	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nna1-RC	FBtr0340673	4446	913aa	FBpp0309515	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEF7	-	-
Nna1-RD	FBtr0340674	4357	1084aa	FBpp0309516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nna1-RE	FBtr0340675	4322	1089aa	FBpp0309517	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NGD4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nna1-RF	FBtr0340676	4130	913aa	FBpp0309518	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEF7	-	-
Nna1-RB	FBtr0340672	3750	937aa	FBpp0309514	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Nna1-RG	FBtr0340677	3183	748aa	FBpp0309519	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NF40	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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