Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: Pde8 FBgn0266377

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Description

Phosphodiesterase 8

Gene Synonyms

Location

Primary_assembly 2R: 23,657,567-23,680,844 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 12 transcripts (splice variants), 73 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pde8-RO	FBtr0344184	4895	1050aa	FBpp0310596	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGU3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde8-RI	FBtr0344182	5562	914aa	FBpp0310594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NNF2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pde8-RE	FBtr0344178	5393	905aa	FBpp0310590	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W1L9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde8-RK	FBtr0344183	5389	914aa	FBpp0310595	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NNF2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pde8-RB	FBtr0344179	4331	904aa	FBpp0310591	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGT9 Q8MLR0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde8-RD	FBtr0344177	3982	805aa	FBpp0310589	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLR1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pde8-RA	FBtr0344180	3939	914aa	FBpp0310592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NNF2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pde8-RN	FBtr0344181	3939	949aa	FBpp0310593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGU6	-	-
Pde8-RC	FBtr0344176	2855	400aa	FBpp0310588	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95T53	-	-
Pde8-RP	FBtr0480522	1234	119aa	FBpp0428313	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PDF0	-	-
Pde8-RR	FBtr0480524	792	215aa	FBpp0428315	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
Pde8-RQ	FBtr0480523	679	122aa	FBpp0428314	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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