Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG45050 FBgn0266410

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Gene Synonyms

Location

Primary_assembly 3R: 9,340,216-9,362,994 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 8 transcripts (splice variants), 74 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG45050-RG	FBtr0344363	6468	199aa	FBpp0310736	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHF4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45050-RB	FBtr0344367	5876	199aa	FBpp0310740	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHF4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45050-RD	FBtr0344366	5855	199aa	FBpp0310739	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHF4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45050-RE	FBtr0344365	5640	199aa	FBpp0310738	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHF4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45050-RI	FBtr0344370	2529	183aa	FBpp0310743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGY1	-	-
CG45050-RH	FBtr0344369	2368	183aa	FBpp0310742	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGY1 Q8T3W4	-	-
CG45050-RC	FBtr0344368	2344	199aa	FBpp0310741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHF4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG45050-RF	FBtr0344364	1778	199aa	FBpp0310737	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WQ62 Q9VHF4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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