Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: muc FBgn0283658

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Description

midline uncoordinated

Gene Synonyms

Location

Primary_assembly 2L: 7,426,866-7,430,329 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 6 transcripts (splice variants), 82 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
muc-RB	FBtr0079444	2331	512aa	FBpp0079072	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM14	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
muc-RF	FBtr0332529	2195	512aa	FBpp0304797	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM14	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
muc-RE	FBtr0332528	2147	496aa	FBpp0304796	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCG1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
muc-RD	FBtr0332527	2126	489aa	FBpp0304795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCU4	-	-
muc-RC	FBtr0332526	2078	473aa	FBpp0304794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCA2	-	-
muc-RA	FBtr0079445	1955	421aa	FBpp0079073	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PGZ9 B1PH16 B1PH28 B1PH40 Q1WWF8 Q7KTK9	-	-

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Summary

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