Summary
- Splice variants
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DB built by FlyBase

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Gene: hbs FBgn0287864

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Description

hibris

Gene Synonyms

Location

Primary_assembly 2R: 15,011,396-15,042,134 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
hbs-RC	FBtr0345419	5478	1235aa	FBpp0311546	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9X4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
hbs-RB	FBtr0087414	4722	1235aa	FBpp0086545	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9X4 C4IXZ2 Q9V787	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
hbs-RA	FBtr0087413	4701	1228aa	FBpp0086544	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MRA3	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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