Summary
- Splice variants
- Transcript comparison
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Sequence
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Literature
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Pan-taxonomic Compara
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- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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DB built by FlyBase

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Gene: Yif1 FBgn0288631

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Description

Yip1-interacting factor 1

Gene Synonyms

Location

Primary_assembly 3R: 26,717,871-26,719,806 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 70 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Yif1-RC	FBtr0085039	1522	402aa	FBpp0084411	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A891LYC2 H8F4V3 Q6NNZ6 Q8IMR4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Yif1-RA	FBtr0085037	1507	397aa	FBpp0084409	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VBC5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Yif1-RB	FBtr0085038	1495	393aa	FBpp0084410	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGH0 Q8IMR3 Q8MTA2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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