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DB built by FlyBase

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Gene: Abl FBgn0000017

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Description

Abl tyrosine kinase

Gene Synonyms

Location

Primary_assembly 3L: 16,615,866-16,647,882 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 10 transcripts (splice variants), 36 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Abl-RF	FBtr0330133	6315	1723aa	FBpp0303166	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Abl-RB	FBtr0112790	12564	1638aa	FBpp0111702	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNU2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RJ	FBtr0345369	12510	1620aa	FBpp0311523	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P00522 X2JGR4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RC	FBtr0330130	6261	1705aa	FBpp0303163	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCT8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RI	FBtr0330136	6060	1666aa	FBpp0303169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFI8	-	-
Abl-RA	FBtr0075357	6006	1620aa	FBpp0075116	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P00522 X2JGR4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RD	FBtr0330131	5967	1607aa	FBpp0303164	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFI5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RE	FBtr0330132	5913	1589aa	FBpp0303165	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFX0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RG	FBtr0330134	5712	1522aa	FBpp0303167	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PI83	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Abl-RH	FBtr0330135	5658	1504aa	FBpp0303168	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCU1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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