Blastoderm-specific gene 25D
Primary_assembly 2L: 5,271,728-5,278,548 reverse strand.
BDGP6.32:AE014134.6
This gene has 7 transcripts (splice variants) and 109 orthologues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
Bsg25D-RG | FBtr0310625 | 4666 | 1118aa | FBpp0302745 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PC27 | NM_001273164 NM_001273164.2 NP_001260093 NP_001260093.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
Bsg25D-RB | FBtr0079084 | 4585 | 1091aa | FBpp0078718 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VMS6 | NM_164637 NM_164637.3 NP_723072 NP_723072.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Bsg25D-RE | FBtr0302568 | 4549 | 1079aa | FBpp0291724 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G2J635 M9MRD3 | NM_001201770 NM_001201770.2 NP_001188699 NP_001188699.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Bsg25D-RF | FBtr0310624 | 4525 | 1071aa | FBpp0302744 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E8NHA5 M9PB42 | NM_001273163 NM_001273163.2 NP_001260092 NP_001260092.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Bsg25D-RC | FBtr0079085 | 4065 | 1032aa | FBpp0078719 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IPK8 | NM_164638 NM_164638.3 NP_723073 NP_723073.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Bsg25D-RH | FBtr0342939 | 3010 | 820aa | FBpp0309716 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P11929 | NM_057568 NM_057568.6 NP_476916 NP_476916.4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
Bsg25D-RD | FBtr0302567 | 2514 | 769aa | FBpp0291723 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9QPC2 | NM_001201769 NM_001201769.2 NP_001188698 NP_001188698.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |