Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: salr FBgn0000287

.

Description

spalt-related

Gene Synonyms

Location

Primary_assembly 2L: 11,358,873-11,373,636 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 142 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
salr-RC	FBtr0307093	5189	1267aa	FBpp0297936	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKH3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
salr-RB	FBtr0080236	4408	1267aa	FBpp0079823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKH3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
salr-RA	FBtr0080235	4142	1267aa	FBpp0079822	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91639 Q5U0U1 Q5U0U8 Q9VKH3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.