Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: eya FBgn0000320

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Description

eyes absent

Gene Synonyms

Location

Primary_assembly 2L: 6,527,447-6,546,976 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 125 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
eya-RA	FBtr0079335	3075	766aa	FBpp0078964	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q05201	NM_078768.4 NM_164693 NM_164693.2 NP_523492.1 NP_723188 NP_723188.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
eya-RB	FBtr0079334	3320	760aa	FBpp0078963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_078768 NM_078768.4 NP_523492 NP_523492.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
eya-RC	FBtr0306113	2832	676aa	FBpp0297250	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND38	NM_001258984 NM_001258984.1 NP_001245913 NP_001245913.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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