Summary
- Splice variants
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Sequence
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: crc FBgn0000370

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Description

cryptocephal

Gene Synonyms

Location

Primary_assembly 2L: 21,310,866-21,319,527 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 8 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
crc-RE	FBtr0332001	2244	381aa	FBpp0304323	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NIR4 Q9NIR5 Q9VID3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
crc-RB	FBtr0081513	2515	298aa	FBpp0081041	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NIR3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
crc-RA	FBtr0081512	1905	381aa	FBpp0081040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
crc-RF	FBtr0332002	1878	372aa	FBpp0304324	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBF8	-	-

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Summary

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