Summary
- Splice variants
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DB built by FlyBase

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Gene: ect FBgn0000451

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Description

ectodermal

Gene Synonyms

Location

Primary_assembly 3L: 10,190,276-10,201,837 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 8 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ect-RF	FBtr0339899	2070	589aa	FBpp0308931	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JAX9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ect-RD	FBtr0301385	2426	280aa	FBpp0290599	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQD9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ect-RA	FBtr0076305	2103	581aa	FBpp0076034	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K1N5	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ect-RB	FBtr0076307	2046	581aa	FBpp0076036	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K1N5	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ect-RE	FBtr0331551	1947	548aa	FBpp0303941	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAP6 M9PHZ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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