Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: E(bx) FBgn0000541

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Location

Chromosome 3L: 233,926-246,912 reverse strand.

BDGP6.28:AE014296.5

About this gene

This gene has 9 transcripts (splice variants), 132 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0332102	9296	2761aa	FBpp0304412	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDH1	NM_001274259.1 NP_001261188.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0072521	9020	2669aa	FBpp0072421	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHV6 Q9W0T1	NM_001169833.2 NM_001274261.1 NM_167817.3 NM_167819.3 NM_206224.3 NP_001163304.1 NP_001261190.1 NP_728505.1 NP_728507.1 NP_995946.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0301348	8975	2669aa	FBpp0290562	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHV6 Q9W0T1	NM_001169833.2 NM_001274261.1 NM_167817.3 NM_167819.3 NM_206224.3 NP_001163304.1 NP_001261190.1 NP_728505.1 NP_728507.1 NP_995946.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0072522	8960	2649aa	FBpp0072422	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_167817.3 NP_728505.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0332101	8652	2163aa	FBpp0304411	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBG5 Q29QY0	NM_001274258.1 NP_001261187.1
-	FBtr0332103	8605	2668aa	FBpp0304413	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PE12	NM_001274260.1 NP_001261189.1
-	FBtr0332104	8517	2669aa	FBpp0304414	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHV6 Q9W0T1	NM_001169833.2 NM_001274261.1 NM_167817.3 NM_167819.3 NM_206224.3 NP_001163304.1 NP_001261190.1 NP_728505.1 NP_728507.1 NP_995946.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0072523	7834	2159aa	FBpp0089425	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_206224.3 NP_995946.1
-	FBtr0301349	7362	2139aa	FBpp0290563	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHV7	NM_001169834.2 NP_001163305.1

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Summary

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Gene-based displays