Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: g FBgn0001087

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Description

garnet

Gene Synonyms

Location

Primary_assembly X: 13,727,204-13,736,278 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 134 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
g-RB	FBtr0073842	3853	1034aa	FBpp0073673	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6W4T4 P54362 Q6NNU5	NM_080046 NP_524785	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
g-RD	FBtr0331709	4147	1033aa	FBpp0304098	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMP9 M9PHJ5	NM_001272599 NM_001272599.1 NP_001259528 NP_001259528.1	-
g-RF	FBtr0331710	3993	967aa	FBpp0304099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PJM7	NM_001272600 NM_001272600.1 NP_001259529 NP_001259529.1	-

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Summary

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Gene-based displays