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DB built by FlyBase

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Gene: RpS5a FBgn0002590

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Description

Ribosomal protein S5a

Gene Synonyms

Location

Primary_assembly X: 17,143,588-17,148,264 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 80 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RpS5a-RC	FBtr0343293	1380	228aa	FBpp0309958	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24186 X2JKU5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpS5a-RB	FBtr0343292	1011	228aa	FBpp0309957	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24186 X2JKU5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpS5a-RA	FBtr0074406	864	228aa	FBpp0074180	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24186 X2JKU5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
RpS5a-RD	FBtr0345132	809	228aa	FBpp0311353	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24186 X2JKU5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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