Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: sca FBgn0003326

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Description

scabrous

Location

Primary_assembly 2R: 12,780,541-12,802,010 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 171 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
sca-RB	FBtr0087856	3796	799aa	FBpp0086969	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P21520	NM_057362.3 NM_165951 NM_165951.2 NP_476710.2 NP_725230 NP_725230.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
sca-RA	FBtr0087855	2876	799aa	FBpp0086968	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P21520	NM_057362 NM_057362.3 NM_165951.2 NP_476710 NP_476710.2 NP_725230.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays