Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: Scr FBgn0003339

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Location

Chromosome 3R: 6,823,120-6,849,981 reverse strand.

BDGP6.28:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 99 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0081657	4140	417aa	FBpp0081163	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V2I1 P09077	NM_079524.4 NM_206443.2 NP_524248.2 NP_996165.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0474171	4140	508aa	FBpp0423170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4D6K1B2	-	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0474172	4140	427aa	FBpp0423171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A499GTR4	-	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0081658	2585	417aa	FBpp0089393	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V2I1 D5SHS1 P09077	NM_079524.4 NM_206443.2 NP_524248.2 NP_996165.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays